local blast database Search Results


clc genomics workbench  (CLC Bio)
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intragenome blast  (Broad Institute Inc)
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Broad Institute Inc intragenome blast
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blastn  (Paracel BLAST)
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Paracel BLAST blastn
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ncbi genbank blast similarity search program  (Biotechnology Information)
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Biotechnology Information ncbi genbank blast similarity search program
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tblastx  (Broad Institute Inc)
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Broad Institute Inc tblastx
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genematcher™ software  (Paracel BLAST)
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Paracel BLAST genematcher™ software
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blastn and blastx algorithms  (Paracel BLAST)
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Paracel BLAST blastn and blastx algorithms
Workflow of the sequences analysis, from raw data to assignment.
Blastn And Blastx Algorithms, supplied by Paracel BLAST, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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local blast database  (Bioedit Company)
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Bioedit Company local blast database
Workflow of the sequences analysis, from raw data to assignment.
Local Blast Database, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ncbi nucleotide database  (Biotechnology Information)
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Biotechnology Information ncbi nucleotide database
Workflow of the sequences analysis, from raw data to assignment.
Ncbi Nucleotide Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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genbank database  (Biotechnology Information)
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Biotechnology Information genbank database
Phylogenetic tree of the msp4 partial gene (786 bp) of Anaplasma marginale haplotypes constructed in Bayesian inference (BI) analysis with MrBayes version 3.2 . The SYM + I model was chosen as the best-fitting nucleotide substitution model by JModelTest version 2.1.10 software [ , ]. The analysis was run for 2,000,000 generations, with 1,000,000 generations discarded as burn-in. Nodal support is indicated as Bayesian posterior probabilities. Sequences from A. centrale ( CP001759 ) and A. ovis ( KU497708 , KU497712 ) were used as outgroups. <t>GenBank</t> accession numbers, hosts, and countries of origin are shown. The sequences from this study are in bold. Am = A. marginale , Ao = A. ovis , Ac = A. centrale
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custom blast database spanning chic1 xist orthologous intervals  (Biotechnology Information)
86
Biotechnology Information custom blast database spanning chic1 xist orthologous intervals
Phylogenetic tree of the msp4 partial gene (786 bp) of Anaplasma marginale haplotypes constructed in Bayesian inference (BI) analysis with MrBayes version 3.2 . The SYM + I model was chosen as the best-fitting nucleotide substitution model by JModelTest version 2.1.10 software [ , ]. The analysis was run for 2,000,000 generations, with 1,000,000 generations discarded as burn-in. Nodal support is indicated as Bayesian posterior probabilities. Sequences from A. centrale ( CP001759 ) and A. ovis ( KU497708 , KU497712 ) were used as outgroups. <t>GenBank</t> accession numbers, hosts, and countries of origin are shown. The sequences from this study are in bold. Am = A. marginale , Ao = A. ovis , Ac = A. centrale
Custom Blast Database Spanning Chic1 Xist Orthologous Intervals, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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program blast refseq  (Biotechnology Information)
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Biotechnology Information program blast refseq
Phylogenetic tree of the msp4 partial gene (786 bp) of Anaplasma marginale haplotypes constructed in Bayesian inference (BI) analysis with MrBayes version 3.2 . The SYM + I model was chosen as the best-fitting nucleotide substitution model by JModelTest version 2.1.10 software [ , ]. The analysis was run for 2,000,000 generations, with 1,000,000 generations discarded as burn-in. Nodal support is indicated as Bayesian posterior probabilities. Sequences from A. centrale ( CP001759 ) and A. ovis ( KU497708 , KU497712 ) were used as outgroups. <t>GenBank</t> accession numbers, hosts, and countries of origin are shown. The sequences from this study are in bold. Am = A. marginale , Ao = A. ovis , Ac = A. centrale
Program Blast Refseq, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Workflow of the sequences analysis, from raw data to assignment.

Journal: PLoS ONE

Article Title: Human Skin Microbiota: High Diversity of DNA Viruses Identified on the Human Skin by High Throughput Sequencing

doi: 10.1371/journal.pone.0038499

Figure Lengend Snippet: Workflow of the sequences analysis, from raw data to assignment.

Article Snippet: The aforementioned databases were scanned using the BlastN and BlastX algorithms provided by Paracel Blast (Striking Development), a software capable of executing searches on multiple non-shared-memory processors simultaneously.

Techniques: Sequencing

Phylogenetic tree of the msp4 partial gene (786 bp) of Anaplasma marginale haplotypes constructed in Bayesian inference (BI) analysis with MrBayes version 3.2 . The SYM + I model was chosen as the best-fitting nucleotide substitution model by JModelTest version 2.1.10 software [ , ]. The analysis was run for 2,000,000 generations, with 1,000,000 generations discarded as burn-in. Nodal support is indicated as Bayesian posterior probabilities. Sequences from A. centrale ( CP001759 ) and A. ovis ( KU497708 , KU497712 ) were used as outgroups. GenBank accession numbers, hosts, and countries of origin are shown. The sequences from this study are in bold. Am = A. marginale , Ao = A. ovis , Ac = A. centrale

Journal: Parasites & Vectors

Article Title: First report of Anaplasma marginale in the European bison Bison bonasus

doi: 10.1186/s13071-025-07056-8

Figure Lengend Snippet: Phylogenetic tree of the msp4 partial gene (786 bp) of Anaplasma marginale haplotypes constructed in Bayesian inference (BI) analysis with MrBayes version 3.2 . The SYM + I model was chosen as the best-fitting nucleotide substitution model by JModelTest version 2.1.10 software [ , ]. The analysis was run for 2,000,000 generations, with 1,000,000 generations discarded as burn-in. Nodal support is indicated as Bayesian posterior probabilities. Sequences from A. centrale ( CP001759 ) and A. ovis ( KU497708 , KU497712 ) were used as outgroups. GenBank accession numbers, hosts, and countries of origin are shown. The sequences from this study are in bold. Am = A. marginale , Ao = A. ovis , Ac = A. centrale

Article Snippet: The obtained sequences were compared with the GenBank database (Basic Local Alignment Search Tool [BLAST], National Center for Biotechnology Information [NCBI], USA) and then submitted to GenBank.

Techniques: Construct, Software